phylosignal - Exploring the Phylogenetic Signal in Continuous Traits

A collection of tools to explore the phylogenetic signal in univariate and multivariate data. The package provides functions to plot traits data against a phylogenetic tree, different measures and tests for the phylogenetic signal, methods to describe where the signal is located and a phylogenetic clustering method.

Last updated 1 years ago

7.20 score 16 stars 100 scripts 309 downloads

bioseq - A Toolbox for Manipulating Biological Sequences

Classes and functions to work with biological sequences (DNA, RNA and amino acid sequences). Implements S3 infrastructure to work with biological sequences as described in Keck (2020) <doi:10.1111/2041-210X.13490>. Provides a collection of functions to perform biological conversion among classes (transcription, translation) and basic operations on sequences (detection, selection and replacement based on positions or patterns). The package also provides functions to import and export sequences from and to other package formats.

Last updated 2 years ago

6.94 score 20 stars 2 packages 72 scripts 387 downloads

rleafmap - Interactive Maps with R and Leaflet

Display spatial data with interactive maps powered by the open- source JavaScript library 'Leaflet' (see <https://leafletjs.com/>). Maps can be rendered in a web browser or displayed in the HTML viewer pane of 'RStudio'. This package is designed to be easy to use and can create complex maps with vector and raster data, web served map tiles and interface elements.

Last updated 1 years ago

4.08 score 24 stars 8 scripts 183 downloads